PacMass 2nd Spring meeting
May 17, 2023
UW South Lake Union Campus, Building C, Room 123 AB, 815 Mercer St, Seattle**
5:30-6:30 pm social hour, 6:30~7:30 pm speaker presentation
“Mapping the Diversity in Spatio-temporal Regulation of G Protein-Coupled Receptors.”
Prof. Ruth Huttenhain, Stanford University
Talk sponsored by ASMS Speaker Travel Award
G protein-coupled receptors (GPCRs) regulate diverse physiological processes in response to hormones, neurotransmitters, odorants, and light, making these receptors drug targets for many diseases. Despite their relevance, our understanding of their signaling is mostly limited to known signal transducers and second messengers. These are however insufficient to explain the diverse physiological effects mediated by GPCRs, suggesting additional specialization on the cellular level.
We leverage a proximity biotin labeling method based on the engineered peroxidase APEX combined with DIA-based proteomics for a panel of eleven GPCRs. Taking snapshots of their proximal proteome over a time course of activation, we demonstrated that GPCR-APEX-MS has the capacity to simultaneously capture interaction networks and cellular location of the activated receptors with high temporal resolution.
**We have arranged to have a security guard stationed at the gate of the garage under the building, and parking will be free.*** Once inside the garage, you can use the elevators to get into the building and then exit the building after the meeting. Free street parking is available after 6 pm. The street-level building entrance doors close at 5:30 pm, but one of the PacMass officers will be by the entrance door by the front desk of the building in case you arrive between 5:30-6:30 pm.
PacMass Spring 2023 Meeting
Date and Time: Wednesday, April 5, 2023, 5:30-6:30 pm Social Hour, 6:30~6:40 pm Annual Business Meeting, 6:40~7:40 pm Speaker Presentation.
Speaker: Prof. A. Daniel Jones, Michigan State University, Department of Biochemistry and Molecular Biology, https://bmb.natsci.msu.edu/faculty/a-daniel-jones/current-research.aspx
Title: Exploring the human serum metabolome and exposome in the Isle of Wight birth cohort
Location: UW South Lake Union Campus, Building C, Room 123 AB, 815 Mercer St, Seattle, see also the attached directions. ***We have arranged to have a security guard stationed at the gate of the garage under the building, and parking will be free.*** Once inside the garage, you can use the elevators to get into the building and then exit the building after the meeting. Free street parking is available after 6 pm. The street-level building entrance doors close at 5:30 pm, but one of the PacMass officers will be by the entrance door by the front desk of the building in case you arrive after 5:30 pm.
Please send an email to rschoenh@fredhutch.org in case you have any questions about the PacMass meeting. We look forward to seeing you soon!
Members Night , November 16, 2023
PacMass Members’ Night Social and Poster Session, to be held at the Fred Hutchinson Cancer Center. Come and mingle, share your research, and enjoy food and refreshments.
Date: Wednesday, November 16, 2022
Times:
5:00-5:30 pm, poster set up
5:30 pm-8 pm, Social and Poster Session
8:00-8:15 pm, take down posters.
Location: Fred Hutchinson Cancer Center, Room B1-072/074/076, Weintraub Bldg., 1100 Fairview Ave. N, Seattle, WA 98109
Parking: We have arranged for a Hutch parking lot to be open to us between 4:45-6:00 pm (it’s a gated parking lot, but you will not need to pay and the gate should be open). Please see the attached pdf for a map of the campus, with the parking lot indicated by a red rectangle (Employee Parking). Two other Visitor Parking areas might also have available spots (marked with white on blue Ps in the pdf).
*** Call for new or previously presented Posters ***
Share your research and present your posters – new or previously presented at other events this year (8′ wide x 4′ high poster boards will be available). At least one of the authors must be a member of PacMass. (Membership is free; membership requests can be sent to me via email at rschoenh@fredhutch.org.) Please submit your title, authors, and author affiliations to me at rschoenh@fredhutch.org by Tuesday, November 15, to facilitate the preparation of a printed program.
PacMass Fall 2022 Meeting
Date and Time: Wednesday, October 12, 5.30-8pm
In-Person Location: UW South Lake Union, Building F, room 106. Free (PacMass sponsored) parking is available in E/F garage. If you enter after 5.30, let security know that you are coming for the Mass Spectrometry Meeting in F106.
Zoom invite details will be emailed by Monday 10/07 (to be coordinated with AV at SLU)
Agenda:
5.30 – 6.30 Social hour with pizza and beer provided by Shimadzu
6.30 – 7.30ish Featured presentation with Zoom remote option by
Prof. Kim Alonge, University of Washington, School of Pharmacy
Title: “Mass spectrometry analysis of brain glycans in neurometabolic diseases.”
Parking information entering the building after hours:
All participants can park for free in garage under E/F buildings at SLU. Let the Security know that you are coming for Mass Spectrometry meeting in room F 106. After the event, security will raise the gate arms allowing guests to leave.
In case you arrive to the closed door to the F-building (after 5.30pm) – there may be someone at the door, you can call a colleague already inside, call the room (room number with the zoom details TBD) or enter through the garage and elevator to the lobby.
PacMass Spring 2022 Meeting
Greetings PacMass Members,
We hope you are doing well and you have had a good 2022 so far! We have missed meeting with you in person, and we are excited to start a new year of PacMass meetings. We invite you to our 2022 Spring meeting, which will take place as a type of mixed mode meeting, both in person and in a virtual fashion. We are delighted to have Prof. Devin Schweppe from the University of Washington as our speaker. Please see below for the in-person and Zoom meeting details.
In addition, since this is the first meeting of the year, a few minutes will be spent on an organization update and officer elections before Prof. Schweppe’s presentation.
As of now, the officer candidates for this coming year are listed below. Also, we would like to thank Mia Chagoya for her work as Assistant Program Chair on behalf of PacMass over the last couple of years. We very much appreciated her contribution.
If one of you would like to join us as an Assistant Program Chair, please feel free to let us know. We welcome additional input and ideas at any time.
Martin Sadilek, Program Chair
Dale Whittington, Assistant Program Chair
Miklos Guttman, Assistant Program Chair
Abhigya Mookherjee, Assistant Program Chair
Sanjit (Sunny) Uppal, Assistant Program Chair
Yi He, Treasurer
Regine Schoenherr, Secretary
Chad Lessard, Web Administration
PacMass Spring 2022 Meeting details:
Date and Time: Tuesday, April 12, 11:55-1ish pm. Lunch time meeting (however, as a COVID pre-caution we will not serve any food or refreshments).
In-Person Location: Chemistry Building conference room 102, University of Washington (see attached map)
Zoom invite details can be found below.
Speaker: Prof. Devin Schweppe, University of Washington, Genome Sciences, https://www.schweppelab.org/home
Title: Multiplexed Mapping of Complex Proteomes
In addition, The MDPI journal, Molecules, is issuing a Special Issue on the topic Mass Spectrometry to Illuminate Glycosylation. Guest Editor Abhigya Mookherjee (abhigm@uw.edu) would like to spread the word that they are accepting manuscripts for this. Anyone who would be interested in publishing their work as part of this Special Issue can contact Abby to discuss one-on-one.
More details can be found here:
https://www.mdpi.com/journal/molecules/special_issues/MS_Glycosylation
Roadway Runoff As A Source of Toxic Trace Contaminants To Surface Waters
Prof. Edward Kolodziej
Associate Professor
University of Washington
Sciences and Mathematics-Tacoma
Civil and Environmental Engineering-Seattle
Center for Urban Waters (Tacoma, WA)
https://www.ce.washington.edu/facultyfinder/edward-kolodziej
Thursday April 15, 2021, 12:00 – 1:30 pm
Via Zoom!
Zoom invitations will be sent out to PacMass members!
Details for joining are here: http://www.pacmass.org/membership/
PacMass Members’ Night Social and Poster Session
There are still slots for poster submissions available!
Wednesday, November 13, 2019 at the Fred Hutchinson Cancer Research Center
5:00-5:30 pm, poster set up
5:30 pm-8 pm, Social and Poster Session
8:00-8:15 pm, take down posters.
Fred Hutchinson Cancer Research Center, Room B1-072/074/076, Weintraub Bldg., 1100 Fairview Ave. N, Seattle, WA 98109
Fred Hutchinson Campus MapShare your research and present your posters – new or previously presented at other events this year (8′ wide x 4′ high poster boards will be available). At least one of the authors must be a member of PacMass. (Membership is free; membership requests can be sent to me via email at rschoenh@fredhutch.org.) Please submit your title, authors, and author affiliations to me at rschoenh@fredhutch.org by Tuesday, November 12, to facilitate the preparation of a printed program.
Congratulations to our Logo Contest Winners!
1st Place Prize – Julia Robbins (F)
2nd Place Prize – Meagan Gadzuk-Shea (A)
3rd Place Prize – Nathan Laha (B)
Improving Data Quality and Coverage in Metabolomics with Applications to Colon Cancer
The Pacific Northwest Mass Spectrometry Group Spring Meeting
Dr. Daniel Raftery
Professor, Dept. of Anesthesiology and Pain Medicine
Adjunct Professor, Dept. of Chemistry
University of Washington
Member, Fred Hutchinson Cancer Research Center
Director, NORC Metabolomics Sub-Core Facility
Wednesday, June 13th, 2018
UW South Lake Union Campus,
Building C, Room 123 AB,
815 Mercer St, Seattle
Social Hour 5:30-6:30 pm
Speaker Presentation 6:30-7:30 pm
Newborn Screening, Diagnosis, and Prognosis for Inherited Genetic Diseases by Mass Spectrometry: From Research Laboratory to Worldwide Deployment
The Pacific Northwest Mass Spectrometry Group Winter Meeting
Dr. Michael Gelb
Professor and Boris and Barbara L. Weinstein Endowed Chair in Chemistry
Adjunct Professor of Biochemistry,
Dept. of Chemistry
University of Washington
Tuesday, February 13, 2018
UW South Lake Union Campus
Building C, Room C123 A/B
815 Mercer St, Seattle
5:30 – 6:25 pm: Social Hour
6:25 – 6:40 pm: Annual Business
6:40 pm: Presentation
PacMass Members’ Night
Social and Poster Session
Wednesday, November 1, 2017
Fred Hutchinson Cancer Research Center
Room B1-072/074/076
Weintraub Bldg.
1100 Fairview Ave. N, Seattle, WA 98109
5:00-5:30 pm, poster set up
5:30 pm-8 pm, Social and Poster Session
8:00-8:15 pm, take down posters.
Insect transmission of plant pathogens: lessons from proteomics
Dr. Michelle ‘Cilia’ Heck
Boyce Thompson Institute, USDA ARS, and Cornell University
Wednesday, September 27th
UW South Lake Union Campus
Building C, Room C123 A/B
815 Mercer St, Seattle
5:30 – 6:30 pm: Social Hour
6:30 pm: Presentation
On the building of the Skyline targeted mass spectrometry software
The Pacific Northwest Mass Spectrometry Group Spring Meeting
Brendan MacLean
Department of Genome Sciences
University of Washington
Wednesday, May 17, 2016
UW South Lake Union Campus
Building C, Room C123 A/B
815 Mercer St, Seattle
5:30 – 6:30 pm: Social Hour
6:30 pm: Presentation
Mass spectrometry for the discovery of volatile biomarkers of lung infections: A chromatographer’s perspective.
The Pacific Northwest Mass Spectrometry Group Winter Meeting
Prof. Heather D. Bean
Arizona State University
Wednesday, March 1, 2017
UW South Lake Union Campus
Building C, Room C123 A/B
815 Mercer St, Seattle
5:30 – 6:30 pm: Social Hour
6:30 pm: Presentation
Lipidomics by Ion Mobility-Mass Spectrometry
The Pacific Northwest Mass Spectrometry Group Fall Meeting
Dr. Yi He
University of Washington
Wednesday, October 6, 2016
UW South Lake Union Campus
Building C, Room C123 A/B
815 Mercer St, Seattle
5:30 – 6:30 pm: Social Hour
6:30 pm: Presentation
Chemical Production by Fermentation: Higher Throughput Mass Spec for Designer Cell Factory Screening
The Pacific Northwest Mass Spectrometry Group Spring Meeting
Dr. Libin Xu
Department of Medicinal Chemistry
University of Washington
Wednesday, February 24, 2016
UW South Lake Union Campus
Building C, Room C123 A/B
815 Mercer St, Seattle
5:30 – 6:30 pm: Social Hour
6:30 pm: Presentation
The Pacific Northwest Mass Spectrometry Group Winter Meeting
Dr. Daniela Grabs
Arzeda Corporation
Wednesday, February 24, 2016
UW South Lake Union Campus
Building C, Room C123 A/B
815 Mercer St, Seattle
5:30 – 6:30 pm: Social Hour
6:30: Officer elections followed by presentation
The Pacific Northwest Mass Spectrometry Group
Annual Member’s Night Social and Poster Session
Share your research and present your posters – new or previously presented at other events this year (8′ wide x 4′ high poster boards will be available).
At least one of the authors must be a member of PacMass.
(Membership is free; membership requests can be sent to me via email at rschoenh@fredhutch.org.)
Please submit your title, authors, and author affiliations to me
at rschoenh@fredhutch.org by Monday, November 2th, to facilitate the preparation of a printed program.
Wednesday, November 4, 2015
5:00 – 5:30 pm: poster setup
5:30 – 8:00 pm: social and poster session
8:00 – 8:15 pm: poster take down
Fred Hutch
Weintraub Building, Room B1-072/074/076
1100 Fairview Ave N., Seattle
The Pacific Northwest Mass Spectrometry Group – 2015 Winter Meeting
“Mass Spectrometry in Polymer and Materials Science”
Chrys Wesdemiotis
Distinguished Professor, Dept. of Chemistry, University of Akron, OH
April 20, 2015
UW South Lake Union
Room C123 A/B
Social: 5:30-6:30pm
Talk: 6:30-8:00
The Pacific Northwest Mass Spectrometry Group – 2015 Winter Meeting
“Developing new capabilities for complex ion manipulations based upon Structures for Lossless Ion Manipulations”
Richard “Dick” Smith
Batelle Fellow, Chief Scientist in the Biological Sciences Division, and Director of Proteome Research, PNNL, Richland WA
February 05, 2015
UW South Lake Union
Room E130 A/B
Social: 5:30-6:30pm
Talk: 6:30-8:00
The Pacific Northwest Mass Spectrometry Group – Autumn Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Annual Member’s Night and Social
November 19, 2014
Fred Hutchinson Cancer Research Center
Room B1-072, Weintraub Bldg.
Poster setup: 5:00-5:30pm
Social and poster session: 5:30-8:00pm
Take down posters: 8:00-8:15pm
The Pacific Northwest Mass Spectrometry Group – Autumn Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Autumn Meeting
Brandon Ruotolo
Assistant Professor, Department of Chemistry
University of Michigan
Ion Mobility-Mass Spectrometry: From Structural Proteomics to Protein Folding Diseases
October 14, 2014
UW South Lake Union
C123AB
Social Hour: 5:30-6:30pm
Presentation: 6:30pm
The Pacific Northwest Mass Spectrometry Group – Summer Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Summer Meeting
Pieter Dorrenstein
If microbes share chemical information, we should do the same?
The creation of Google maps and GPS-type infrastructure for the molecular analysis of microbes and people
August 26, 2014
UW South Lake Union
E130AB
Social Hour: 5:30-6:30pm
Presentation: 6:30pm
The Pacific Northwest Mass Spectrometry Group – Spring Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Spring Meeting
Panel Discussion
Brittany Holmes, Washington State Dept. of Agriculture
Greg Mercer, FDA office of regulatory affairs
Jim Hungerford, FDA office of regulatory affairs
Subject: What’s really in your shopping cart? Mass Spectrometry and food safety
May 28, 2014
Fred Hutchinson Cancer Research Center
Weintraub Building, Pelton Auditorium
Social Hour: 5:30-6:30pm
Presentation: 6:30pm
The Pacific Northwest Mass Spectrometry Group – Winter Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Winter Meeting
Dr. James “Jake” McKinlay
Assistant Professor
Department of Biology
Indiana University, Bloomington
Subject: Tracking stable isotopes through the metabolism of a biofuel-producing bacterium at work, rest, and play
February 4, 2014
UW SLU Campus
815 Mercer St, Seattle, WA 98109
Social Hour: 5:30-6:30pm
Presentation: 6:30pm
The Pacific Northwest Mass Spectrometry Group – Member’s Night 2013
The Pacific Northwest Mass Spectrometry Group invites you to our Member’s Night Social and Poster Session
Location: Fred Hutchinson Cancer Research Center
Room B1-072/074/076
Weintraub Bldg, 1100 Fairview Ave. N
Seattle, WA 98109
The Pacific Northwest Mass Spectrometry Group – Fall Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Fall Meeting
Joint event with the Northwest Metabolomics Research Center (NWMRC)
The 2013 NWMRC Metabolomics Symposium
The Pacific Northwest Mass Spectrometry Group – Spring Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Fall Meeting
Dave Goodlett
Professor
Department of Medicinal Chemistry, University of Washington
“Nine Years of Biomedical MS at the UW
October 4th, 2012
UW SLU Campus
815 Mercer St, Seattle, WA 98109
Social Hour: 5:30-6:30pm
Presentation: 6:30pm
Video: http://tcs.slu.washington.edu/tcs/#page:recordingList&pageNumber:1&id:D03C0DCA-9B2E-4B34-B884-FAC6AB895152
The Pacific Northwest Mass Spectrometry Group – Winter Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Winter Meeting
Annual Poster Session
Members’ Night Social!
November 8th, 2011
Room M1-A305/A307, Arnold Bldg.
Fred Hutchinson Research Center
1100 Fairview Ave. N, Seattle, WA 98109
Poster set-up: 5-5:30pm
Poster take-down: 7:45-8pm
Poster Session: 5:30-8pm
The Pacific Northwest Mass Spectrometry Group – Fall Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Fall Meeting
Bingyun Sun
Assistant Professor of Chemistry
Simon Fraser University
“Functional Proteomics-methodology development, application in biomarker discovery, and a connection between the past and future”
Monday, September 26, 2011
Dendreon
3005 First Avenue
Seattle, WA 98121
Poster Session: 5:30-8pm
The Pacific Northwest Mass Spectrometry Group – Spring Meeting
We are very pleased to announce this spring’s PacMass meeting
Professor Tim Griffin
Department of Biochemistry, Molecular Biology and Biophysics
University of Minnesota
“Mouth proteomics: new discoveries in oral biology and cancer via mass spectrometry.”
Thursday, June 16, 2011
Fred Hutchinson Cancer Research Center
Thomas Building, Room D1-080/084
1100 Fairview Ave N
Seattle WA 98109
Social hour: 5:30-6:30 pm
Presentation: 6:30 pm
The Pacific Northwest Mass Spectrometry Group – Spring Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Spring Meeting
Dr. Ruedi Aebersold
Institute of Molecular Systems Biology
ETH in Zurich
Mapping and Measuring Proteomes
Thursday, April 8, 2010
Unniversity of Washington
South Lake Union Building
Orin Smith Auditorium
815 Mercer St., Seattle, WA
Social Hour 5:30-6:30
Presentation 6:30
The Pacific Northwest Mass Spectrometry Group – Winter Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Winter Meeting
Dr. Alan Marshall
Robert O. Lawton Professor of Chemistry and Biochemistry
Florida State University
Director of the Ion Cyclotron Resonance (ICR) Program
National High Magnetic Field Laboratory
“Reading Chemical ‘Fine Print’: The Key to Exploiting Nature’s Compositional Complexity”
Monday February, 8, 2010
Genome Sciences Building
Foege Auditorium
Social Hour 5:30 pm
Lecture 6:30 pm
The Pacific Northwest Mass Spectrometry Group – Winter Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Winter Meeting
Members’ Night Social and Poster Session
Thursday November 19, 2009
South Lake Union
Building C, Room 123 A/B
5pm to 8pm
Food and beverages sponsored by Bruker
The Pacific Northwest Mass Spectrometry Group – Summer Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Summer Meeting
Dr. Tomas Vaisar
Research Assistant Professor
University of Washington, Department of Medicine
Division of Metabolism, Endocrinology, and Nutrition
“Can a good cop go bad? Clues from HDL proteomics”
Thursday July 23, 2009
Unniversity of Washington
South Lake Union, Room C123A
Reception 5pm
Lecture 6pm
The Pacific Northwest Mass Spectrometry Group – Winter Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Winter Meeting
Dr. Jennifer Brodbelt
University of Texas at Austin
“Probing DNA/Drug Interactions by Tandem Mass Spectrometry”
Monday, February 23, 2009
University of Washington, Foege Auditorium
(in the south end of the WH Foege Genome Sciences Bldg.)
Social hour 5:30-6:30 with drinks and hors d’ oeuvres
Officer elections will be held at 6:30pm, followed by presentation
The Pacific Northwest Mass Spectrometry Group – Summer Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Summer Meeting
Amanda Paulovich, M.D., Ph.D.
Assistant Member, Clinical Research Division; Director
Early Detection Initiative, Fred Hutchinson Cancer Research Center
“A Multi-step Biomarker Discovery Pipeline Demonstrated in a Mouse Model of Breast Cancer.”
Tuesday, September 30, 2008
Fred Hutchinson Cancer Research Center
Weintraub Building, Pelton Auditorium (B1-065)
Social hour from 5:30-6:30
The presentation will follow at 6:30 pm
The Pacific Northwest Mass Spectrometry Group – Summer Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Summer Meeting
Prof. A. Daniel Jones
Department of Biochemistry and Molecular Biology
Department of Chemistry, Michigan State University
“High-throughput LC/MS approaches to large-scale analyses of metabolic phenotypes”
Thursday, May 22, 2008
Fred Hutchinson Cancer Research Center
Arnold Building, Room M1-A305/307
6-7 pm social hour, drinks and hors d’oeuvres
7-8 pm presentation
The Pacific Northwest Mass Spectrometry Group – Winter Meeting
The Pacific Northwest Mass Spectrometry Group invites you to our Winter Meeting
Peter O’Connor, Ph.D.
Assistant Director
BUSM Mass Spectrometry Resource
“New Instrumentation and applications of FTICR mass spectrometers and Electron Capture Dissociation”
March 10, 2008
University of Washington
Seattle, WA
5:30-6:30 social
6:30-7:30 elections and presentation